The university logo consists of seven elements arranged in seven positions using seven colours.

In totality, together with the motto 'TOWARDS HUMAN PERFECTION", it symbolizes the University's quest for excellence within the context of the State of Brunei Darussalam which subscribes to the concept of a monarchial Islamic Malay culture.

The foremost element is the Holy Quran in green binding, the emblem of Islam as the official religion of the nation. Its open pages facing upwards signify that the Holy Book represents an infinite source of knowledge. The borders of those pages viewed as steps of a ladder indicate the kind of systematic and incremental effort needed to achieve any desired goal. The uppermost placing of the Holy Quran further points to the role of Islam as the supreme guide for all activities.

The second element, the name Universiti Brunei Darussalam, written in black Jawi Script of the kufic type, overlaying a white background reveals its identity. The white signifies integrity and purity. Placed immediately beneath the shadow of the Holy Quran, it represents the hope of obtaining direct guidance from Allah in its efforts to reach its goals.

The third element consists of a nib of a pen employed in forming the Jawi letters "ya, ba and dal", symbolizes that the mastery of the skills of writing is essential for study, for the development of knowledge and the operation of all other efforts. Its yellow colour represents the sovereignty of Malay Monarchy. Furthermore, the jawi script points to the emergence of the Malay race activated by Islam since its arrival in this region.

The fourth element is made up of a stylized blue circle formed by the letters UBD and is emblematic of the University's desire for the kind of progress needed to enable it to stand equal among the nations of the world. The sea blue colour symbolizes the inexhaustible expanse of divine knowledge. It is so vast that human being cannot acquire all the knowledge.

The fifth element, the red emblem against a royal yellow background is derived from the national flag and depicts the sovereignty of a Malay monarchy. Its central position indicates the significance of a nation upholding a system of values which encompasses mutual relationships among its citizens and between the citizens and His Majesty the Sultan as the defender and leader of the nation.

The sixth element comprises the stylized golden panicles of paddy in the form of a lighted candle. It represents the hope for peace and prosperity which is viewed as attainable only through learning which leads to radiant living. The five shoots also represent the five pillars of Islam.

The seventh element consists of the green moon crescent placed beneath the other elements of the logo. It indicates that Islam assumes the role of foundation and context for, as well as organizer of a way of life. Within this context, the University's motto 'TOWARDS HUMAN PERFECTION' is to be realized.

Finally, the number 7 enshrines the recognition of the omniscience and omnipotence of God. In HIM all knowledge resides.